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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs598933 chr11:77586358 G/A INTS4L1 chr7:64601603-64694600:+ 0.44 7.98 1.09E-14 Box Plot
THCA rs59897075 chr8:11785080 T/C SGK223 chr8:8175258-8244008:- 0.37 6.88 1.87E-11 Box Plot
THCA rs59915006 chr2:132259374 A/G CCDC74B chr2:130896860-130902707:- -0.39 -7.05 6.13E-12 Box Plot
THCA rs59920449 chr2:101054289 G/A LOC285359 chr3:101431278-101432259:+ 0.34 6.44 2.92E-10 Box Plot
THCA rs59935374 chr7:66309058 TC/T CCT6P1 chr7:65216129-65228341:+ 0.44 6.76 3.94E-11 Box Plot
THCA rs5994367 chr22:31455816 A/C C22orf32 chr22:42475699-42480287:+ 0.42 6.33 5.75E-10 Box Plot
THCA rs5994367 chr22:31455816 A/C CBY1 chr22:39052641-39069859:+ 0.42 6.06 2.82E-9 Box Plot
THCA rs5994367 chr22:31455816 A/C CYTSA chr22:24666786-24813707:+ 0.38 6.16 1.57E-9 Box Plot
THCA rs5994367 chr22:31455816 A/C NOL12 chr22:38077680-38089485:+ 0.35 5.9 6.78E-9 Box Plot
THCA rs5994367 chr22:31455816 A/C POLR2F chr22:38348614-38437922:+ 0.37 6.19 1.28E-9 Box Plot
THCA rs5994367 chr22:31455816 A/C RBX1 chr22:41347351-41369313:+ 0.35 6.16 1.51E-9 Box Plot
THCA rs5994367 chr22:31455816 A/C SNRPD3 chr22:24951471-25005947:+ 0.42 5.91 6.35E-9 Box Plot
THCA rs5994367 chr22:31455816 A/C TUBGCP6 chr22:50656118-50683421:- 0.37 6.26 8.35E-10 Box Plot
THCA rs5994367 chr22:31455816 A/C TXN2 chr22:36863083-36878077:- 0.46 6.89 1.77E-11 Box Plot
THCA rs5995107 chr22:35892800 A/G ADSL chr22:40742504-40786467:+ -0.45 -6.15 1.64E-9 Box Plot